Using the previously defined units we can define the parameter that we need for the reactions as follow.
<listOfParameters> <parameter id="k" units="ps" value="100.0"/> <parameter id="ka" units="pMps" value="1e8"/> <parameter id="kd" units="ps" value="0.01"/> <parameter id="mu" units="ps" value="0.5"/> <parameter id="mu2" units="ps" value="0.005"/> </listOfParameters>
The unit of k
must be "per
second", because the annihilation reaction will be defined as a
first-order reaction in the concentration of species
A
.