Figure 7.1.  Snapshot of simulation at 1 second simulation time.

Figure 7.2.  Snapshot of simulation at 80 seconds simulation time.

Here it can be seen that the B molecules are created from the immobilised A molecule in CompartmentThree. The B molecules will thereafter diffuse throughout the cell. In the small ComartmentTwo two B molecules can react and create one D molecule as seen in Figure 7.2, “ Snapshot of simulation at 80 seconds simulation time. ”.