The MesoRD toolbox guide

Sara Eriksson


Table of Contents

Introduction
1. How to run the MesoRD toolbox
Installation
How to start the MesoRD toolbox
Example of the toolbox
2. Menus
File
New
Close
Tools
Make a movie
Time plot
Snapshot
Labels
Compartment name
Legend
Species name
Marker size
3. Panels
Panel Species
Current species
Species colors
Current compartment
Panel Plots
3D
2D
Projection
Slice
Panel Axes
X, Y and Z
Axes slider
Panel Rotate
Rotate
Zoom
Restore
Panel Time steps
Run
Stop
Choose time point
Beginning
Back
Forward
End
A. GNU Free Documentation License
PREAMBLE
APPLICABILITY AND DEFINITIONS
VERBATIM COPYING
COPYING IN QUANTITY
MODIFICATIONS
COMBINING DOCUMENTS
COLLECTIONS OF DOCUMENTS
AGGREGATION WITH INDEPENDENT WORKS
TRANSLATION
TERMINATION
FUTURE REVISIONS OF THIS LICENSE
ADDENDUM: How to use this License for your documents

List of Figures

1.1. The toolbox
2.1. Chosen compartment
2.2. Chosen species
2.3. Snapshot
3.1. 3-dim plot
3.2. 2-dim plot
3.3. Projection plot
3.4. Slice plot